Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.3□□□□□ -0.28
CLN5O75503 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.3□□□□□ -0.28
CLN5O75503 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.3□□□□□ -0.28
CLN5O75503 AL591684.3-201ENST00000605187 298 ntBASIC13.3□□□□□ -0.28
CLN5O75503 AC091076.1-201ENST00000610741 619 ntBASIC13.3□□□□□ -0.28
CLN5O75503 AC010331.1-201ENST00000611423 582 ntBASIC13.3□□□□□ -0.28
CLN5O75503 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.3□□□□□ -0.28
CLN5O75503 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.3□□□□□ -0.28
CLN5O75503 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.3□□□□□ -0.28
CLN5O75503 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 AC106881.1-201ENST00000605849 3329 ntBASIC13.3□□□□□ -0.28
CLN5O75503 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CLN5O75503 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.3□□□□□ -0.28
CLN5O75503 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLN5O75503 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLN5O75503 AC004817.3-201ENST00000602957 2129 ntBASIC13.3□□□□□ -0.28
CLN5O75503 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLN5O75503 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 AL391256.1-201ENST00000443260 1855 ntBASIC13.29□□□□□ -0.28
CLN5O75503 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CLN5O75503 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.29□□□□□ -0.28
CLN5O75503 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.29□□□□□ -0.28
CLN5O75503 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 AL358472.4-201ENST00000633140 710 ntBASIC13.29□□□□□ -0.28
CLN5O75503 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.29□□□□□ -0.28
CLN5O75503 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 AC118758.2-201ENST00000614242 2813 ntBASIC13.29□□□□□ -0.28
CLN5O75503 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.29□□□□□ -0.28
CLN5O75503 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.29□□□□□ -0.28
CLN5O75503 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLN5O75503 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.28□□□□□ -0.28
CLN5O75503 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CLN5O75503 AP002414.1-201ENST00000391405 1147 ntBASIC13.28□□□□□ -0.28
CLN5O75503 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.28□□□□□ -0.28
CLN5O75503 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN5O75503 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN5O75503 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN5O75503 KRT16P4-201ENST00000453883 522 ntBASIC13.28□□□□□ -0.28
CLN5O75503 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.28□□□□□ -0.28
CLN5O75503 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms