Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 AL139424.1-201ENST00000607572 797 ntBASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 HLA-A-201ENST00000376802 1334 ntBASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 PRAL-201ENST00000624952 3286 ntBASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 CICP24-201ENST00000605464 2705 ntBASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 AC092910.1-201ENST00000482027 1129 ntBASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 AC004706.3-202ENST00000621574 984 ntBASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 AC007326.2-201ENST00000624224 7579 ntBASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.63■□□□□ 0.57
R3HCC1Q9Y3T6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 AC136632.2-201ENST00000512891 861 ntBASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 AP005117.1-202ENST00000581724 1908 ntBASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 AC079781.5-202ENST00000641784 3743 ntBASIC18.62■□□□□ 0.57
R3HCC1Q9Y3T6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 AL161772.1-201ENST00000610494 4412 ntBASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms