Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 AP001269.4-201ENST00000609611 512 ntBASIC14.84□□□□□ -0.03
CLN6Q9NWW5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLN6Q9NWW5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLN6Q9NWW5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 KRT16P4-201ENST00000453883 522 ntBASIC14.83□□□□□ -0.04
CLN6Q9NWW5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 NPAP1P7-201ENST00000613027 823 ntBASIC14.83□□□□□ -0.04
CLN6Q9NWW5 AL589182.2-201ENST00000619332 1049 ntBASIC14.83□□□□□ -0.04
CLN6Q9NWW5 AL139288.1-201ENST00000623748 933 ntBASIC14.83□□□□□ -0.04
CLN6Q9NWW5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN6Q9NWW5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 U82695.1-201ENST00000635752 1889 ntBASIC14.82□□□□□ -0.04
CLN6Q9NWW5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 AL009178.2-201ENST00000597278 2719 ntBASIC14.82□□□□□ -0.04
CLN6Q9NWW5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 AC132008.2-207ENST00000454517 770 ntBASIC14.82□□□□□ -0.04
CLN6Q9NWW5 AC106795.1-205ENST00000512851 1056 ntBASIC14.82□□□□□ -0.04
CLN6Q9NWW5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN6Q9NWW5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms