Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS2Q99743 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS2Q99743 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS2Q99743 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS2Q99743 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS2Q99743 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS2Q99743 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS2Q99743 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS2Q99743 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS2Q99743 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPAS2Q99743 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 GPAA1P2-202ENST00000606848 1787 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 MRPL20P1-201ENST00000400819 433 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 UPF3AP3-201ENST00000420996 769 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 POU5F1P6-201ENST00000466990 990 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
NPAS2Q99743 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS2Q99743 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS2Q99743 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS2Q99743 AC010654.1-201ENST00000615722 808 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 AC069224.1-201ENST00000566372 1715 ntBASIC15.9■□□□□ 0.14
NPAS2Q99743 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS2Q99743 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS2Q99743 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NPAS2Q99743 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS2Q99743 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
NPAS2Q99743 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.89■□□□□ 0.13
NPAS2Q99743 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.89■□□□□ 0.13
NPAS2Q99743 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.89■□□□□ 0.13
NPAS2Q99743 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 PI4KAP1-204ENST00000612579 1703 ntBASIC15.89■□□□□ 0.13
NPAS2Q99743 LINC01144-201ENST00000626198 1710 ntBASIC15.89■□□□□ 0.13
NPAS2Q99743 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.89■□□□□ 0.13
NPAS2Q99743 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS2Q99743 AC112482.1-201ENST00000492080 688 ntBASIC15.89■□□□□ 0.13
NPAS2Q99743 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS2Q99743 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.89■□□□□ 0.13
NPAS2Q99743 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NPAS2Q99743 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NPAS2Q99743 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NPAS2Q99743 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS2Q99743 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NPAS2Q99743 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS2Q99743 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms