Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CCL13Q99616 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 HLA-J-203ENST00000494367 1087 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL13Q99616 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL13Q99616 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 AC061975.2-201ENST00000581722 295 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 MIR4321-201ENST00000592276 80 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC018529.1-201ENST00000613063 361 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 MIR6080-201ENST00000617359 66 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 DOC2GP-204ENST00000639052 2548 ntBASIC13.56□□□□□ -0.24
CCL13Q99616 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCL13Q99616 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.56□□□□□ -0.24
CCL13Q99616 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.56□□□□□ -0.24
CCL13Q99616 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.56□□□□□ -0.24
CCL13Q99616 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 LINC02199-201ENST00000506655 2702 ntBASIC13.55□□□□□ -0.24
CCL13Q99616 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL13Q99616 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 AC025678.2-201ENST00000562061 970 ntBASIC13.55□□□□□ -0.24
CCL13Q99616 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL13Q99616 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.55□□□□□ -0.24
CCL13Q99616 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.55□□□□□ -0.24
CCL13Q99616 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 AP001059.3-201ENST00000619053 235 ntBASIC13.55□□□□□ -0.24
CCL13Q99616 AC093028.1-201ENST00000622998 982 ntBASIC13.55□□□□□ -0.24
CCL13Q99616 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL13Q99616 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.55□□□□□ -0.24
CCL13Q99616 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCL13Q99616 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCL13Q99616 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCL13Q99616 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms