Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 IQSEC3P1-201ENST00000538799 536 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AL133499.1-201ENST00000596207 608 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 MIR6069-201ENST00000620069 79 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 MIR1227-201ENST00000408484 88 ntBASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 FLJ38576-201ENST00000623820 2459 ntBASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD1Q96PZ7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 AC106886.4-201ENST00000623557 2502 ntBASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 AHCYP2-201ENST00000430630 1300 ntBASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 AL049840.4-201ENST00000602422 811 ntBASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 KRT8P49-201ENST00000604166 1432 ntBASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 BRI3BPP1-201ENST00000594224 787 ntBASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms