Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 AP000347.1-202ENST00000435868 847 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CEND1P1-201ENST00000451006 455 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 AL139010.1-201ENST00000454878 894 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 AC022145.2-201ENST00000598203 171 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 AL513210.1-201ENST00000629608 234 ntBASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.77■□□□□ 0.12
PDLIM5Q96HC4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 AC022532.1-201ENST00000624563 1728 ntBASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM5Q96HC4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 EEF1DP4-201ENST00000446006 880 ntBASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 UXT-AS1-201ENST00000590504 1525 ntBASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM5Q96HC4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms