Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 UGT1A2P-201ENST00000454886 866 ntBASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 AL512638.1-201ENST00000457493 794 ntBASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ECHDC3Q96DC8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 AZGP1P1-201ENST00000411909 902 ntBASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ECHDC3Q96DC8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 CDC14C-201ENST00000428251 1719 ntBASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
ECHDC3Q96DC8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.08■□□□□ 0.16
ECHDC3Q96DC8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms