Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 IGLL3P-201ENST00000412472 434 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 KRT18P67-201ENST00000432816 1264 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 UNC93B7-201ENST00000509439 705 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 MIR4751-201ENST00000578027 74 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 MIR4321-201ENST00000592276 80 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AL009183.1-201ENST00000603760 355 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AL078644.1-201ENST00000609881 752 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 AL589702.1-201ENST00000641229 1509 ntBASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC44A1Q8WWI5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AF186996.4-201ENST00000467186 377 ntBASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AC108751.1-201ENST00000490852 363 ntBASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 FAM215A-202ENST00000632077 792 ntBASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AC073439.1-201ENST00000624121 1774 ntBASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC44A1Q8WWI5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 AC092474.2-201ENST00000424288 719 ntBASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 VN2R19P-201ENST00000442399 1052 ntBASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC44A1Q8WWI5 AC002347.1-201ENST00000569543 541 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms