Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPCS2P4-201ENST00000436160 681 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPDYE11-202ENST00000450699 704 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC069335.1-201ENST00000489972 472 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPDYE9P-201ENST00000570642 692 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPDYE10P-202ENST00000612005 668 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SPDYE8P-202ENST00000612377 668 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 NFIC-211ENST00000641145 8399 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC016027.1-202ENST00000607927 1699 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTCD2Q8WV60 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTCD2Q8WV60 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PTCD2Q8WV60 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTCD2Q8WV60 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTCD2Q8WV60 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 WASH6P-202ENST00000359512 1437 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 LINC02447-202ENST00000501888 2146 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 FER1L4-210ENST00000615531 5998 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 FAM58DP-201ENST00000428076 619 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC109322.1-201ENST00000524499 1264 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AL365223.1-201ENST00000574864 1297 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC022148.2-201ENST00000586176 560 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC004835.2-201ENST00000603762 682 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AC093028.1-201ENST00000622998 982 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AL512356.3-201ENST00000623005 461 ntBASIC16.45■□□□□ 0.22
PTCD2Q8WV60 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTCD2Q8WV60 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC068418.2-201ENST00000577309 3703 ntBASIC16.44■□□□□ 0.22
PTCD2Q8WV60 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms