Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 AL592424.1-201ENST00000563624 1536 ntBASIC17.98■□□□□ 0.47
TRIM50Q86XT4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM50Q86XT4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC023310.3-201ENST00000557027 670 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC100756.1-201ENST00000562736 682 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC138749.3-201ENST00000567691 622 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC025048.3-201ENST00000590609 569 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC116165.1-201ENST00000611806 668 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC005702.4-201ENST00000618393 416 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 AC007431.3-201ENST00000623221 587 ntBASIC17.97■□□□□ 0.47
TRIM50Q86XT4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM50Q86XT4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC138969.3-201ENST00000546612 1459 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC138932.2-201ENST00000548268 1459 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC126755.4-201ENST00000549796 1459 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 MEIS3P1-201ENST00000495167 958 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC093004.1-201ENST00000508850 424 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.96■□□□□ 0.47
TRIM50Q86XT4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM50Q86XT4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms