Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC005052.1-201ENST00000625181 2492 ntBASIC17.22■□□□□ 0.35
DCLRE1AQ6PJP8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DCLRE1AQ6PJP8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DCLRE1AQ6PJP8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DCLRE1AQ6PJP8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 CU639417.3-201ENST00000624240 1404 ntBASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 MEP1AP4-201ENST00000423244 1087 ntBASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 AC140912.1-201ENST00000577171 1054 ntBASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 AC074044.1-201ENST00000609673 707 ntBASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 AC004790.1-201ENST00000612686 536 ntBASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DCLRE1AQ6PJP8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCLRE1AQ6PJP8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.21■□□□□ 0.34
DCLRE1AQ6PJP8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCLRE1AQ6PJP8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCLRE1AQ6PJP8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DCLRE1AQ6PJP8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 PCDHA14-201ENST00000506751 2298 ntBASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCLRE1AQ6PJP8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DCLRE1AQ6PJP8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms