Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL118558.3-201ENST00000607414 1079 ntBASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 PKD1P6-201ENST00000343738 4769 ntBASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPAQ5VT25 FLJ38576-201ENST00000623820 2459 ntBASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 AC103810.3-201ENST00000583567 96 ntBASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 FLII-221ENST00000578558 2377 ntTSL 5 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 RAC2-202ENST00000401529 569 ntTSL 4 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 IGHJ2P-201ENST00000454480 60 ntBASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC23.93■■□□□ 1.42
CDC42BPAQ5VT25 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 FOS-202ENST00000535987 1402 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 C2orf27AP3-201ENST00000434123 579 ntBASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 AL354718.3-201ENST00000616414 581 ntBASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 AL008638.5-201ENST00000623814 1298 ntBASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 CR382287.1-201ENST00000623954 586 ntBASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPAQ5VT25 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 MIR1202-201ENST00000408529 83 ntBASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CALR4P-201ENST00000431943 946 ntBASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 FAM197Y7-201ENST00000432892 766 ntBASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPAQ5VT25 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AC091804.1-201ENST00000486888 567 ntBASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 PFN2-215ENST00000497148 743 ntTSL 4 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 RHOQP1-201ENST00000555758 579 ntBASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms