Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.12■□□□□ 0.01
PSMD4P55036 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.12■□□□□ 0.01
PSMD4P55036 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 AC073389.1-201ENST00000595595 795 ntBASIC15.12■□□□□ 0.01
PSMD4P55036 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.12■□□□□ 0.01
PSMD4P55036 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PSMD4P55036 AC103702.1-201ENST00000548801 2630 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.11■□□□□ 0.01
PSMD4P55036 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 UPF3AP3-201ENST00000420996 769 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.11■□□□□ 0.01
PSMD4P55036 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.11■□□□□ 0.01
PSMD4P55036 GPX1P2-201ENST00000429271 606 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 ADH5P3-201ENST00000433842 1137 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 TIMM8BP1-201ENST00000452384 211 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 ALG1L5P-201ENST00000482043 771 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.11■□□□□ 0.01
PSMD4P55036 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.11■□□□□ 0.01
PSMD4P55036 YBX1P5-201ENST00000509441 847 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.11■□□□□ 0.01
PSMD4P55036 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.11■□□□□ 0.01
PSMD4P55036 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 AC027307.2-201ENST00000591252 911 ntBASIC15.11■□□□□ 0.01
PSMD4P55036 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PSMD4P55036 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PSMD4P55036 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.1■□□□□ 0.01
PSMD4P55036 AC098859.1-201ENST00000502915 1238 ntBASIC15.1■□□□□ 0.01
PSMD4P55036 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms