Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC3P51654 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC3P51654 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC3P51654 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GPC3P51654 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC3P51654 SERBP1P3-201ENST00000459980 809 ntBASIC17.8■□□□□ 0.44
GPC3P51654 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.8■□□□□ 0.44
GPC3P51654 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC3P51654 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC3P51654 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 AC004233.3-201ENST00000607794 1269 ntBASIC17.8■□□□□ 0.44
GPC3P51654 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC3P51654 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC3P51654 AL033527.5-202ENST00000641632 1098 ntBASIC17.8■□□□□ 0.44
GPC3P51654 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GPC3P51654 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 PCDH8P1-201ENST00000428983 2773 ntBASIC17.8■□□□□ 0.44
GPC3P51654 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GPC3P51654 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 BTBD7P1-201ENST00000447253 1453 ntBASIC17.8■□□□□ 0.44
GPC3P51654 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC3P51654 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC3P51654 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC3P51654 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GPC3P51654 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GPC3P51654 AL592424.1-201ENST00000563624 1536 ntBASIC17.79■□□□□ 0.44
GPC3P51654 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.79■□□□□ 0.44
GPC3P51654 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GPC3P51654 AL136982.4-201ENST00000437689 1740 ntBASIC17.79■□□□□ 0.44
GPC3P51654 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GPC3P51654 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GPC3P51654 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.79■□□□□ 0.44
GPC3P51654 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 AC135586.1-201ENST00000539323 574 ntBASIC17.79■□□□□ 0.44
GPC3P51654 AC044860.1-202ENST00000559481 777 ntBASIC17.79■□□□□ 0.44
GPC3P51654 SPDYE22P-201ENST00000582158 798 ntBASIC17.79■□□□□ 0.44
GPC3P51654 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.79■□□□□ 0.44
GPC3P51654 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC3P51654 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC3P51654 AC079328.2-201ENST00000561241 3354 ntBASIC17.79■□□□□ 0.44
GPC3P51654 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.79■□□□□ 0.44
GPC3P51654 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GPC3P51654 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GPC3P51654 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 DOC2GP-204ENST00000639052 2548 ntBASIC17.78■□□□□ 0.44
GPC3P51654 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms