Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A12P48065 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A12P48065 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A12P48065 EEF1DP4-201ENST00000446006 880 ntBASIC15.57■□□□□ 0.08
SLC6A12P48065 AL139010.1-201ENST00000454878 894 ntBASIC15.57■□□□□ 0.08
SLC6A12P48065 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A12P48065 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.57■□□□□ 0.08
SLC6A12P48065 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A12P48065 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A12P48065 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A12P48065 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A12P48065 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A12P48065 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A12P48065 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.56■□□□□ 0.08
SLC6A12P48065 PRAL-201ENST00000624952 3286 ntBASIC15.56■□□□□ 0.08
SLC6A12P48065 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC211486.1-202ENST00000416371 468 ntBASIC15.56■□□□□ 0.08
SLC6A12P48065 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC211476.1-201ENST00000503899 468 ntBASIC15.56■□□□□ 0.08
SLC6A12P48065 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
SLC6A12P48065 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A12P48065 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A12P48065 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC004835.2-201ENST00000603762 682 ntBASIC15.56■□□□□ 0.08
SLC6A12P48065 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A12P48065 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A12P48065 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A12P48065 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A12P48065 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A12P48065 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A12P48065 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A12P48065 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A12P48065 REXO1L1P-202ENST00000608646 1974 ntBASIC15.55■□□□□ 0.08
SLC6A12P48065 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A12P48065 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A12P48065 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A12P48065 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A12P48065 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A12P48065 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A12P48065 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A12P48065 AC092865.5-201ENST00000545435 363 ntBASIC15.55■□□□□ 0.08
SLC6A12P48065 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A12P48065 BANF1P1-201ENST00000553684 263 ntBASIC15.55■□□□□ 0.08
SLC6A12P48065 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC6A12P48065 AC026979.3-201ENST00000607315 403 ntBASIC15.55■□□□□ 0.08
SLC6A12P48065 AC009093.7-201ENST00000623853 1223 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms