Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CBX5P45973 RCN1P2-201ENST00000398357 915 ntBASIC14.03□□□□□ -0.16
CBX5P45973 POM121L3P-201ENST00000419331 1163 ntBASIC14.03□□□□□ -0.16
CBX5P45973 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.03□□□□□ -0.16
CBX5P45973 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.03□□□□□ -0.16
CBX5P45973 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.03□□□□□ -0.16
CBX5P45973 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.03□□□□□ -0.16
CBX5P45973 AC114341.1-201ENST00000618070 349 ntBASIC14.03□□□□□ -0.16
CBX5P45973 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.03□□□□□ -0.16
CBX5P45973 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.03□□□□□ -0.16
CBX5P45973 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CBX5P45973 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.02□□□□□ -0.16
CBX5P45973 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.02□□□□□ -0.16
CBX5P45973 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CBX5P45973 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CBX5P45973 REXO1L8P-201ENST00000604378 1897 ntBASIC14.02□□□□□ -0.16
CBX5P45973 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CBX5P45973 NCF1C-201ENST00000438382 1427 ntBASIC14.02□□□□□ -0.16
CBX5P45973 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.02□□□□□ -0.17
CBX5P45973 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CBX5P45973 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.02□□□□□ -0.17
CBX5P45973 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CBX5P45973 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CBX5P45973 AC022616.7-201ENST00000525383 220 ntBASIC14.02□□□□□ -0.17
CBX5P45973 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.02□□□□□ -0.17
CBX5P45973 BNIP3P18-201ENST00000593976 575 ntBASIC14.02□□□□□ -0.17
CBX5P45973 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.02□□□□□ -0.17
CBX5P45973 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CBX5P45973 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CBX5P45973 AC107918.4-201ENST00000641966 3141 ntBASIC14.02□□□□□ -0.17
CBX5P45973 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.02□□□□□ -0.17
CBX5P45973 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CBX5P45973 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.02□□□□□ -0.17
CBX5P45973 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.02□□□□□ -0.17
CBX5P45973 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.02□□□□□ -0.17
CBX5P45973 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CBX5P45973 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CBX5P45973 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CBX5P45973 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.01□□□□□ -0.17
CBX5P45973 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CBX5P45973 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CBX5P45973 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CBX5P45973 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.01□□□□□ -0.17
CBX5P45973 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CBX5P45973 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CBX5P45973 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CBX5P45973 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CBX5P45973 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms