Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.42■□□□□ 0.54
COPB2P35606 AGGF1P2-201ENST00000426656 2106 ntBASIC18.42■□□□□ 0.54
COPB2P35606 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.42■□□□□ 0.54
COPB2P35606 AC007274.1-201ENST00000439805 662 ntBASIC18.42■□□□□ 0.54
COPB2P35606 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.42■□□□□ 0.54
COPB2P35606 AC104596.2-201ENST00000512793 793 ntBASIC18.42■□□□□ 0.54
COPB2P35606 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.42■□□□□ 0.54
COPB2P35606 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.42■□□□□ 0.54
COPB2P35606 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.42■□□□□ 0.54
COPB2P35606 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.42■□□□□ 0.54
COPB2P35606 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.42■□□□□ 0.54
COPB2P35606 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.42■□□□□ 0.54
COPB2P35606 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
COPB2P35606 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
COPB2P35606 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COPB2P35606 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.42■□□□□ 0.54
COPB2P35606 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
COPB2P35606 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COPB2P35606 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 RN7SL837P-201ENST00000463010 287 ntBASIC18.41■□□□□ 0.54
COPB2P35606 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.41■□□□□ 0.54
COPB2P35606 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.41■□□□□ 0.54
COPB2P35606 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.41■□□□□ 0.54
COPB2P35606 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.41■□□□□ 0.54
COPB2P35606 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COPB2P35606 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.41■□□□□ 0.54
COPB2P35606 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.41■□□□□ 0.54
COPB2P35606 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 AC079328.2-201ENST00000561241 3354 ntBASIC18.41■□□□□ 0.54
COPB2P35606 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COPB2P35606 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.41■□□□□ 0.54
COPB2P35606 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AC105020.1-201ENST00000435356 2205 ntBASIC18.4■□□□□ 0.54
COPB2P35606 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.4■□□□□ 0.54
COPB2P35606 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 TTTY23B-201ENST00000442790 549 ntBASIC18.4■□□□□ 0.54
COPB2P35606 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.4■□□□□ 0.54
COPB2P35606 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 HILS1-202ENST00000545329 423 ntBASIC18.4■□□□□ 0.54
COPB2P35606 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COPB2P35606 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.4■□□□□ 0.54
COPB2P35606 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.4■□□□□ 0.54
COPB2P35606 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
COPB2P35606 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AL118508.1-201ENST00000613502 2345 ntBASIC18.4■□□□□ 0.54
COPB2P35606 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COPB2P35606 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.4■□□□□ 0.54
COPB2P35606 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AC018695.7-201ENST00000624587 2492 ntBASIC18.4■□□□□ 0.54
COPB2P35606 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COPB2P35606 AL691432.1-201ENST00000596308 1422 ntBASIC18.4■□□□□ 0.54
COPB2P35606 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPB2P35606 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPB2P35606 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
COPB2P35606 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPB2P35606 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.39■□□□□ 0.54
COPB2P35606 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COPB2P35606 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms