Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TM4SF1P30408 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF1P30408 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TM4SF1P30408 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.79■□□□□ 0.76
TM4SF1P30408 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.79■□□□□ 0.76
TM4SF1P30408 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF1P30408 AC093813.1-201ENST00000605066 256 ntBASIC19.79■□□□□ 0.76
TM4SF1P30408 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 AL008638.5-201ENST00000623814 1298 ntBASIC19.79■□□□□ 0.76
TM4SF1P30408 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TM4SF1P30408 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TM4SF1P30408 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.79■□□□□ 0.76
TM4SF1P30408 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TM4SF1P30408 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.78■□□□□ 0.76
TM4SF1P30408 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
TM4SF1P30408 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TM4SF1P30408 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF1P30408 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF1P30408 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 IGHJ2P-201ENST00000454480 60 ntBASIC19.78■□□□□ 0.76
TM4SF1P30408 AKR7A2P1-201ENST00000460134 915 ntBASIC19.78■□□□□ 0.76
TM4SF1P30408 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.78■□□□□ 0.76
TM4SF1P30408 AC078819.1-201ENST00000547454 765 ntBASIC19.78■□□□□ 0.76
TM4SF1P30408 AC012085.1-201ENST00000548270 765 ntBASIC19.78■□□□□ 0.76
TM4SF1P30408 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF1P30408 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TM4SF1P30408 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF1P30408 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF1P30408 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TM4SF1P30408 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 FAM197Y7-201ENST00000432892 766 ntBASIC19.77■□□□□ 0.76
TM4SF1P30408 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.77■□□□□ 0.76
TM4SF1P30408 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.77■□□□□ 0.76
TM4SF1P30408 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 RN7SL190P-201ENST00000582519 257 ntBASIC19.77■□□□□ 0.76
TM4SF1P30408 AL450472.2-201ENST00000603663 1156 ntBASIC19.77■□□□□ 0.76
TM4SF1P30408 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF1P30408 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TM4SF1P30408 REXO1L1P-202ENST00000608646 1974 ntBASIC19.77■□□□□ 0.75
TM4SF1P30408 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TM4SF1P30408 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.77■□□□□ 0.75
TM4SF1P30408 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TM4SF1P30408 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF1P30408 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms