Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 AC098614.1-201ENST00000368528 745 ntBASIC18.72■□□□□ 0.59
ERCC3P19447 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC3P19447 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC3P19447 SPDYE18-201ENST00000510091 1050 ntBASIC18.72■□□□□ 0.59
ERCC3P19447 DOC2GP-202ENST00000514950 1163 ntBASIC18.72■□□□□ 0.59
ERCC3P19447 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.72■□□□□ 0.59
ERCC3P19447 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC3P19447 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC3P19447 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 AC020765.3-201ENST00000613051 740 ntBASIC18.72■□□□□ 0.59
ERCC3P19447 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.72■□□□□ 0.59
ERCC3P19447 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 PCDHB19P-201ENST00000570871 2371 ntBASIC18.72■□□□□ 0.59
ERCC3P19447 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ERCC3P19447 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC3P19447 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ERCC3P19447 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC3P19447 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC3P19447 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC3P19447 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC3P19447 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ERCC3P19447 AP002490.2-201ENST00000524791 560 ntBASIC18.71■□□□□ 0.59
ERCC3P19447 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC3P19447 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC3P19447 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC3P19447 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC3P19447 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.71■□□□□ 0.59
ERCC3P19447 CHCHD2P3-201ENST00000603038 451 ntBASIC18.71■□□□□ 0.59
ERCC3P19447 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC3P19447 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC3P19447 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC3P19447 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC3P19447 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ERCC3P19447 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC3P19447 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ERCC3P19447 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ERCC3P19447 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 GPAA1P2-202ENST00000606848 1787 ntBASIC18.7■□□□□ 0.58
ERCC3P19447 AL031731.1-201ENST00000642131 2094 ntBASIC18.7■□□□□ 0.58
ERCC3P19447 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 AC087499.6-201ENST00000411576 835 ntBASIC18.7■□□□□ 0.58
ERCC3P19447 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC3P19447 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC3P19447 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC3P19447 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
ERCC3P19447 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ERCC3P19447 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC3P19447 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
ERCC3P19447 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.7■□□□□ 0.58
ERCC3P19447 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC3P19447 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms