Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 MIR648-201ENST00000385046 94 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 ACTG1P14-201ENST00000446382 1122 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 CEND1P1-201ENST00000451006 455 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 RN7SL589P-201ENST00000481268 310 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 LINC01225-203ENST00000563550 1244 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 AC005829.1-201ENST00000570002 483 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 AC010327.4-202ENST00000591484 748 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 SPTSSB-204ENST00000617024 1292 ntBASIC14.53□□□□□ -0.08
HLA-DOBP13765 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DOBP13765 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DOBP13765 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DOBP13765 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DOBP13765 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 AC063926.3-201ENST00000624734 5658 ntBASIC14.52□□□□□ -0.08
HLA-DOBP13765 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DOBP13765 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.52□□□□□ -0.08
HLA-DOBP13765 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DOBP13765 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DOBP13765 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 AC142381.1-201ENST00000426099 345 ntBASIC14.52□□□□□ -0.09
HLA-DOBP13765 AC112482.1-201ENST00000492080 688 ntBASIC14.52□□□□□ -0.09
HLA-DOBP13765 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 MIR4469-201ENST00000583919 79 ntBASIC14.52□□□□□ -0.09
HLA-DOBP13765 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 AC046158.3-201ENST00000624947 2558 ntBASIC14.52□□□□□ -0.09
HLA-DOBP13765 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DOBP13765 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.52□□□□□ -0.09
HLA-DOBP13765 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DOBP13765 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DOBP13765 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms