Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXD8P13378 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HOXD8P13378 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 AC018665.1-201ENST00000622927 1362 ntBASIC17.63■□□□□ 0.41
HOXD8P13378 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXD8P13378 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXD8P13378 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXD8P13378 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 AL607033.1-201ENST00000623900 1599 ntBASIC17.62■□□□□ 0.41
HOXD8P13378 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 AC011676.5-201ENST00000624864 2660 ntBASIC17.62■□□□□ 0.41
HOXD8P13378 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HOXD8P13378 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXD8P13378 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXD8P13378 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXD8P13378 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXD8P13378 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.62■□□□□ 0.41
HOXD8P13378 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 AC120045.2-201ENST00000567334 178 ntBASIC17.62■□□□□ 0.41
HOXD8P13378 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXD8P13378 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXD8P13378 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXD8P13378 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 AC011477.6-201ENST00000604980 1927 ntBASIC17.61■□□□□ 0.41
HOXD8P13378 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.61■□□□□ 0.41
HOXD8P13378 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 AC134915.1-201ENST00000426461 574 ntBASIC17.61■□□□□ 0.41
HOXD8P13378 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 KRT43P-201ENST00000434019 910 ntBASIC17.61■□□□□ 0.41
HOXD8P13378 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.61■□□□□ 0.41
HOXD8P13378 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 AL049840.4-201ENST00000602422 811 ntBASIC17.61■□□□□ 0.41
HOXD8P13378 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 HCG11-201ENST00000411553 5696 ntBASIC17.61■□□□□ 0.41
HOXD8P13378 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXD8P13378 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HOXD8P13378 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXD8P13378 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXD8P13378 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXD8P13378 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXD8P13378 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXD8P13378 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms