Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AC092919.2-201ENST00000623631 1645 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AL662844.1-201ENST00000546340 181 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AL009183.1-201ENST00000603760 355 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AC023141.13-201ENST00000604991 943 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 AP003680.1-201ENST00000598970 3660 ntBASIC14.34□□□□□ -0.11
H2BFMP0C1H6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.34□□□□□ -0.11
H2BFMP0C1H6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
H2BFMP0C1H6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.33□□□□□ -0.12
H2BFMP0C1H6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 AC109635.5-201ENST00000533593 962 ntBASIC14.33□□□□□ -0.12
H2BFMP0C1H6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
H2BFMP0C1H6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2BFMP0C1H6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms