Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ALDH1A1P00352 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.23■□□□□ 0.51
ALDH1A1P00352 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.22■□□□□ 0.51
ALDH1A1P00352 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 CD8B2-202ENST00000417670 633 ntBASIC18.22■□□□□ 0.51
ALDH1A1P00352 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 NDUFV2P1-201ENST00000596415 907 ntBASIC18.22■□□□□ 0.51
ALDH1A1P00352 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AP005019.2-201ENST00000615104 511 ntBASIC18.22■□□□□ 0.51
ALDH1A1P00352 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 AC087289.5-201ENST00000586076 3175 ntBASIC18.22■□□□□ 0.51
ALDH1A1P00352 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ALDH1A1P00352 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.22■□□□□ 0.51
ALDH1A1P00352 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 SPCS2P2-201ENST00000603270 608 ntBASIC18.21■□□□□ 0.51
ALDH1A1P00352 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 AC128714.1-201ENST00000637035 887 ntBASIC18.21■□□□□ 0.51
ALDH1A1P00352 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ALDH1A1P00352 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.21■□□□□ 0.51
ALDH1A1P00352 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
ALDH1A1P00352 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
ALDH1A1P00352 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CROCCP2-202ENST00000412962 2773 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALDH1A1P00352 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.2■□□□□ 0.5
ALDH1A1P00352 POM121L10P-201ENST00000436994 1285 ntBASIC18.2■□□□□ 0.5
ALDH1A1P00352 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms