Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC241585.1-201ENST00000433527 519 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.6■□□□□ 0.09
CPNE3O75131 COX20P2-201ENST00000452636 358 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 AC098859.1-201ENST00000502915 1238 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 TERF1P3-201ENST00000505638 1227 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 AC138761.1-201ENST00000584393 385 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.6■□□□□ 0.09
CPNE3O75131 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE3O75131 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 AL035456.1-201ENST00000456064 1369 ntBASIC15.6■□□□□ 0.09
CPNE3O75131 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE3O75131 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE3O75131 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 AC092580.3-201ENST00000430932 139 ntBASIC15.59■□□□□ 0.09
CPNE3O75131 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE3O75131 TSPY16P-201ENST00000449843 468 ntBASIC15.59■□□□□ 0.09
CPNE3O75131 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE3O75131 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 AC027369.6-201ENST00000525520 931 ntBASIC15.59■□□□□ 0.09
CPNE3O75131 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.59■□□□□ 0.09
CPNE3O75131 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE3O75131 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE3O75131 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE3O75131 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE3O75131 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE3O75131 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE3O75131 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.58■□□□□ 0.09
CPNE3O75131 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE3O75131 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.58■□□□□ 0.09
CPNE3O75131 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE3O75131 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE3O75131 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 FAM207CP-201ENST00000443486 507 ntBASIC15.58■□□□□ 0.08
CPNE3O75131 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.58■□□□□ 0.08
CPNE3O75131 RNA5SP410-201ENST00000516285 106 ntBASIC15.58■□□□□ 0.08
CPNE3O75131 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 AC020765.3-201ENST00000613051 740 ntBASIC15.58■□□□□ 0.08
CPNE3O75131 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms