Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 BASP1P1-201ENST00000430708 665 ntBASIC18.19■□□□□ 0.5
CHMP2AO43633 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP2AO43633 AL136982.4-201ENST00000437689 1740 ntBASIC18.19■□□□□ 0.5
CHMP2AO43633 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP2AO43633 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.19■□□□□ 0.5
CHMP2AO43633 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHMP2AO43633 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 AC006449.5-201ENST00000610658 2098 ntBASIC18.19■□□□□ 0.5
CHMP2AO43633 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP2AO43633 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP2AO43633 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CHMP2AO43633 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
CHMP2AO43633 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 AC100757.3-201ENST00000622361 1406 ntBASIC18.18■□□□□ 0.5
CHMP2AO43633 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP2AO43633 RPL37AP1-201ENST00000412502 279 ntBASIC18.18■□□□□ 0.5
CHMP2AO43633 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHMP2AO43633 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.18■□□□□ 0.5
CHMP2AO43633 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.18■□□□□ 0.5
CHMP2AO43633 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP2AO43633 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.18■□□□□ 0.5
CHMP2AO43633 AC026979.3-201ENST00000607315 403 ntBASIC18.18■□□□□ 0.5
CHMP2AO43633 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP2AO43633 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP2AO43633 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP2AO43633 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP2AO43633 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP2AO43633 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP2AO43633 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHMP2AO43633 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP2AO43633 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.17■□□□□ 0.5
CHMP2AO43633 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 BCRP1-201ENST00000444246 691 ntBASIC18.17■□□□□ 0.5
CHMP2AO43633 AL139010.1-201ENST00000454878 894 ntBASIC18.17■□□□□ 0.5
CHMP2AO43633 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.17■□□□□ 0.5
CHMP2AO43633 AL079307.3-201ENST00000556114 283 ntBASIC18.17■□□□□ 0.5
CHMP2AO43633 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CHMP2AO43633 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP2AO43633 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP2AO43633 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP2AO43633 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms