Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 AC078925.2-201ENST00000624013 1973 ntBASIC21.97■■□□□ 1.11
CHD2O14647 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CHD2O14647 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHD2O14647 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHD2O14647 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD2O14647 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 RPL17P11-201ENST00000417593 544 ntBASIC21.96■■□□□ 1.11
CHD2O14647 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.96■■□□□ 1.11
CHD2O14647 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.96■■□□□ 1.11
CHD2O14647 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 AC005915.1-201ENST00000624912 2018 ntBASIC21.96■■□□□ 1.11
CHD2O14647 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.96■■□□□ 1.11
CHD2O14647 RN7SL720P-201ENST00000488178 304 ntBASIC21.96■■□□□ 1.11
CHD2O14647 MBP-227ENST00000526111 581 ntTSL 4 BASIC21.96■■□□□ 1.11
CHD2O14647 AC073413.1-201ENST00000603927 732 ntBASIC21.96■■□□□ 1.11
CHD2O14647 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.96■■□□□ 1.11
CHD2O14647 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CHD2O14647 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.96■■□□□ 1.11
CHD2O14647 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD2O14647 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.11
CHD2O14647 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CHD2O14647 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CHD2O14647 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CHD2O14647 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD2O14647 CD8B2-202ENST00000417670 633 ntBASIC21.95■■□□□ 1.1
CHD2O14647 AL354877.1-201ENST00000424412 413 ntBASIC21.95■■□□□ 1.1
CHD2O14647 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.95■■□□□ 1.1
CHD2O14647 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD2O14647 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD2O14647 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CHD2O14647 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD2O14647 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CHD2O14647 MIR769-201ENST00000390225 118 ntBASIC21.94■■□□□ 1.1
CHD2O14647 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.94■■□□□ 1.1
CHD2O14647 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC21.94■■□□□ 1.1
CHD2O14647 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.94■■□□□ 1.1
CHD2O14647 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 AC079336.7-201ENST00000623428 1078 ntBASIC21.94■■□□□ 1.1
CHD2O14647 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD2O14647 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.94■■□□□ 1.1
CHD2O14647 EEF1DP6-201ENST00000449232 372 ntBASIC21.94■■□□□ 1.1
CHD2O14647 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC21.94■■□□□ 1.1
CHD2O14647 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD2O14647 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD2O14647 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHD2O14647 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21.93■■□□□ 1.1
CHD2O14647 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHD2O14647 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.93■■□□□ 1.1
CHD2O14647 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC21.93■■□□□ 1.1
CHD2O14647 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CHD2O14647 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CHD2O14647 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.93■■□□□ 1.1
CHD2O14647 AL645939.5-201ENST00000606834 243 ntBASIC21.93■■□□□ 1.1
CHD2O14647 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.93■■□□□ 1.1
CHD2O14647 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms