Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 AC145423.3-201ENST00000615987 467 ntBASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 ALOX12P2-203ENST00000570921 1945 ntBASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 AC018735.1-201ENST00000437208 1502 ntBASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDC42BPBQ9Y5S2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 HSPB1P2-201ENST00000448722 546 ntBASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AL096828.3-201ENST00000615354 462 ntBASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CDC42BPBQ9Y5S2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.89■■□□□ 1.42
CDC42BPBQ9Y5S2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 RPSAP36-202ENST00000494591 1261 ntBASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 MIR4741-201ENST00000579822 90 ntBASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 AC091271.1-201ENST00000611877 1162 ntBASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPBQ9Y5S2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 ACKR1-201ENST00000368121 1240 ntBASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 MIR663B-201ENST00000408361 115 ntBASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 ACR-203ENST00000529621 708 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms