Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC092053.1-201ENST00000605787 1936 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC092171.3-201ENST00000610122 2651 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 DFFBP1-201ENST00000433250 979 ntBASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ATP5G2P4-201ENST00000442175 420 ntBASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 AC124947.2-201ENST00000547118 1133 ntBASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 AC013467.2-201ENST00000605472 835 ntBASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 AL662844.4-201ENST00000606367 2838 ntBASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA9Q9Y5G4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 AC087499.6-201ENST00000411576 835 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 GPR53P-205ENST00000457298 1084 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms