Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CUEDC1Q9NWM3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AC023141.5-201ENST00000458585 616 ntBASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AC098859.1-201ENST00000502915 1238 ntBASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 DOC2GP-204ENST00000639052 2548 ntBASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.71■□□□□ 0.11
CUEDC1Q9NWM3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CUEDC1Q9NWM3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AL139400.1-201ENST00000366220 510 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 GPS2P2-201ENST00000430745 888 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AJ011932.1-201ENST00000621707 465 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AF228730.6-201ENST00000641497 218 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AC084121.3-201ENST00000641716 218 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AC105233.6-201ENST00000642093 218 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 LINC02199-201ENST00000506655 2702 ntBASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CUEDC1Q9NWM3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CUEDC1Q9NWM3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms