Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 METTL21AP1-201ENST00000438852 635 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 AL139010.1-201ENST00000454878 894 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 AC105021.1-202ENST00000570572 669 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 AC026979.3-201ENST00000607315 403 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 AC007967.4-201ENST00000614700 386 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 AC093028.1-201ENST00000622998 982 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 Z92544.3-201ENST00000624747 417 ntBASIC17.24■□□□□ 0.35
CISHQ9NSE2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CISHQ9NSE2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CISHQ9NSE2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 AC243562.2-201ENST00000561247 970 ntBASIC17.23■□□□□ 0.35
CISHQ9NSE2 AC025678.2-201ENST00000562061 970 ntBASIC17.23■□□□□ 0.35
CISHQ9NSE2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 AL365203.3-201ENST00000609742 2057 ntBASIC17.23■□□□□ 0.35
CISHQ9NSE2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.23■□□□□ 0.35
CISHQ9NSE2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CISHQ9NSE2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CISHQ9NSE2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.22■□□□□ 0.35
CISHQ9NSE2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms