Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PGBD1Q96JS3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 OR6D1P-203ENST00000641209 4860 ntBASIC18.82■□□□□ 0.6
PGBD1Q96JS3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AC142381.1-201ENST00000426099 345 ntBASIC18.82■□□□□ 0.6
PGBD1Q96JS3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AC009093.7-201ENST00000623853 1223 ntBASIC18.82■□□□□ 0.6
PGBD1Q96JS3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 AC005622.1-201ENST00000636801 1703 ntBASIC18.82■□□□□ 0.6
PGBD1Q96JS3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD1Q96JS3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AL592424.1-201ENST00000563624 1536 ntBASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC020765.3-201ENST00000613051 740 ntBASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD1Q96JS3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 RBPMS2P1-201ENST00000437762 623 ntBASIC18.8■□□□□ 0.6
PGBD1Q96JS3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 LINC00628-201ENST00000628516 1289 ntBASIC18.8■□□□□ 0.6
PGBD1Q96JS3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD1Q96JS3 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms