Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.39■□□□□ 0.37
SEMA4DQ92854 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 AP005117.1-202ENST00000581724 1908 ntBASIC17.39■□□□□ 0.37
SEMA4DQ92854 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA4DQ92854 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA4DQ92854 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 BNIP3P1-202ENST00000550043 1585 ntBASIC17.38■□□□□ 0.37
SEMA4DQ92854 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 AC109322.1-201ENST00000524499 1264 ntBASIC17.38■□□□□ 0.37
SEMA4DQ92854 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 AC018529.1-201ENST00000613063 361 ntBASIC17.38■□□□□ 0.37
SEMA4DQ92854 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 AP003680.1-201ENST00000598970 3660 ntBASIC17.38■□□□□ 0.37
SEMA4DQ92854 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA4DQ92854 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA4DQ92854 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 AP001160.2-201ENST00000596071 487 ntBASIC17.37■□□□□ 0.37
SEMA4DQ92854 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 PRAL-201ENST00000624952 3286 ntBASIC17.37■□□□□ 0.37
SEMA4DQ92854 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SEMA4DQ92854 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms