Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC093724.1-201ENST00000448659 1027 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 KRT18P3-201ENST00000451602 1288 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 SLC25A1P1-201ENST00000528351 927 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 WASH6P-202ENST00000359512 1437 ntBASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP1Q8TDR0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AL161772.1-201ENST00000610494 4412 ntBASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AC002056.1-201ENST00000395613 760 ntBASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AC106730.1-201ENST00000566722 1090 ntBASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 AC140113.2-201ENST00000604370 208 ntBASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.94■□□□□ 0.3
TRAF3IP1Q8TDR0 CICP6-201ENST00000457191 2729 ntBASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AC026396.1-201ENST00000419388 421 ntBASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AC112191.1-201ENST00000523689 701 ntBASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AL513190.1-201ENST00000621254 727 ntBASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAF3IP1Q8TDR0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms