Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 RN7SL589P-201ENST00000481268 310 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AC098859.1-201ENST00000502915 1238 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AL671883.3-201ENST00000603274 991 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AC026120.1-201ENST00000611536 926 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 SPTSSB-204ENST00000617024 1292 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 C20orf181-201ENST00000623918 480 ntBASIC15.18■□□□□ 0.02
NUP43Q8NFH3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.17■□□□□ 0.02
NUP43Q8NFH3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 AC008677.1-201ENST00000519230 1561 ntBASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 ADH5P3-201ENST00000433842 1137 ntBASIC15.17■□□□□ 0.02
NUP43Q8NFH3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 FLJ16779-201ENST00000612722 7638 ntBASIC15.17■□□□□ 0.02
NUP43Q8NFH3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.17■□□□□ 0.02
NUP43Q8NFH3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AC046158.3-201ENST00000624947 2558 ntBASIC15.16■□□□□ 0.02
NUP43Q8NFH3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AP005117.1-202ENST00000581724 1908 ntBASIC15.16■□□□□ 0.02
NUP43Q8NFH3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.16■□□□□ 0.02
NUP43Q8NFH3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AC243562.1-201ENST00000560672 389 ntBASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms