Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.46■□□□□ 0.22
KHDC1Q4VXA5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KHDC1Q4VXA5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
KHDC1Q4VXA5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
KHDC1Q4VXA5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 GGT4P-201ENST00000623672 1708 ntBASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AC022532.1-201ENST00000624563 1728 ntBASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AC134684.3-201ENST00000641758 218 ntBASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AC016027.1-202ENST00000607927 1699 ntBASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ME2P1-201ENST00000426028 1970 ntBASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KHDC1Q4VXA5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AL603832.2-201ENST00000566195 2125 ntBASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.44■□□□□ 0.22
KHDC1Q4VXA5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 AL671277.1-201ENST00000429656 993 ntBASIC16.43■□□□□ 0.22
KHDC1Q4VXA5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms