Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.58■□□□□ 0.89
BRPF1P55201 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.58■□□□□ 0.89
BRPF1P55201 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.58■□□□□ 0.89
BRPF1P55201 AC055876.3-201ENST00000431496 288 ntBASIC20.58■□□□□ 0.89
BRPF1P55201 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.58■□□□□ 0.89
BRPF1P55201 FAM207CP-201ENST00000443486 507 ntBASIC20.58■□□□□ 0.89
BRPF1P55201 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.58■□□□□ 0.89
BRPF1P55201 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.58■□□□□ 0.89
BRPF1P55201 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.58■□□□□ 0.89
BRPF1P55201 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 AC105021.1-202ENST00000570572 669 ntBASIC20.58■□□□□ 0.89
BRPF1P55201 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
BRPF1P55201 AC138649.4-201ENST00000612222 287 ntBASIC20.58■□□□□ 0.89
BRPF1P55201 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
BRPF1P55201 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BRPF1P55201 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
BRPF1P55201 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.58■□□□□ 0.88
BRPF1P55201 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.58■□□□□ 0.88
BRPF1P55201 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRPF1P55201 AC134407.2-201ENST00000625089 1978 ntBASIC20.57■□□□□ 0.88
BRPF1P55201 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 AP005117.1-202ENST00000581724 1908 ntBASIC20.57■□□□□ 0.88
BRPF1P55201 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BRPF1P55201 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.57■□□□□ 0.88
BRPF1P55201 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.57■□□□□ 0.88
BRPF1P55201 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
BRPF1P55201 AC026979.3-201ENST00000607315 403 ntBASIC20.57■□□□□ 0.88
BRPF1P55201 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.57■□□□□ 0.88
BRPF1P55201 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.57■□□□□ 0.88
BRPF1P55201 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.57■□□□□ 0.88
BRPF1P55201 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRPF1P55201 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
BRPF1P55201 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.56■□□□□ 0.88
BRPF1P55201 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.56■□□□□ 0.88
BRPF1P55201 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.56■□□□□ 0.88
BRPF1P55201 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BRPF1P55201 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.56■□□□□ 0.88
BRPF1P55201 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.56■□□□□ 0.88
BRPF1P55201 CR383656.12-201ENST00000549567 513 ntBASIC20.56■□□□□ 0.88
BRPF1P55201 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.56■□□□□ 0.88
BRPF1P55201 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.56■□□□□ 0.88
BRPF1P55201 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.56■□□□□ 0.88
BRPF1P55201 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.56■□□□□ 0.88
BRPF1P55201 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.56■□□□□ 0.88
BRPF1P55201 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
BRPF1P55201 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 AL035456.1-201ENST00000456064 1369 ntBASIC20.56■□□□□ 0.88
BRPF1P55201 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRPF1P55201 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRPF1P55201 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 AC007950.2-201ENST00000615045 2347 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms