Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 AC093724.1-201ENST00000448659 1027 ntBASIC16.43■□□□□ 0.22
HADHAP40939 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.43■□□□□ 0.22
HADHAP40939 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
HADHAP40939 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.43■□□□□ 0.22
HADHAP40939 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
HADHAP40939 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 AC073439.1-201ENST00000624121 1774 ntBASIC16.42■□□□□ 0.22
HADHAP40939 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 MIR1233-2-201ENST00000408138 82 ntBASIC16.42■□□□□ 0.22
HADHAP40939 MIR1233-1-201ENST00000408722 82 ntBASIC16.42■□□□□ 0.22
HADHAP40939 AL671277.1-201ENST00000429656 993 ntBASIC16.42■□□□□ 0.22
HADHAP40939 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 RN7SL589P-201ENST00000481268 310 ntBASIC16.42■□□□□ 0.22
HADHAP40939 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.42■□□□□ 0.22
HADHAP40939 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.42■□□□□ 0.22
HADHAP40939 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.42■□□□□ 0.22
HADHAP40939 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HADHAP40939 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 AC112504.1-201ENST00000623415 1841 ntBASIC16.42■□□□□ 0.22
HADHAP40939 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HADHAP40939 LINC02447-202ENST00000501888 2146 ntBASIC16.42■□□□□ 0.22
HADHAP40939 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HADHAP40939 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.42■□□□□ 0.22
HADHAP40939 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.42■□□□□ 0.22
HADHAP40939 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 AP005117.1-202ENST00000581724 1908 ntBASIC16.41■□□□□ 0.22
HADHAP40939 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.41■□□□□ 0.22
HADHAP40939 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
HADHAP40939 PRYP6-201ENST00000514804 343 ntBASIC16.41■□□□□ 0.22
HADHAP40939 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.41■□□□□ 0.22
HADHAP40939 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HADHAP40939 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.41■□□□□ 0.22
HADHAP40939 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HADHAP40939 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms