Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 AC092850.2-201ENST00000623821 2697 ntBASIC17.78■□□□□ 0.44
KRT9P35527 AC104109.2-201ENST00000602919 1418 ntBASIC17.78■□□□□ 0.44
KRT9P35527 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 U82695.1-201ENST00000635752 1889 ntBASIC17.78■□□□□ 0.44
KRT9P35527 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT9P35527 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 HCG4B-203ENST00000450128 991 ntBASIC17.77■□□□□ 0.44
KRT9P35527 RPL13AP23-201ENST00000480739 586 ntBASIC17.77■□□□□ 0.44
KRT9P35527 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT9P35527 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.77■□□□□ 0.44
KRT9P35527 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT9P35527 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.77■□□□□ 0.44
KRT9P35527 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT9P35527 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT9P35527 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT9P35527 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
KRT9P35527 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT9P35527 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT9P35527 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT9P35527 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT9P35527 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT9P35527 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 AC092919.2-201ENST00000623631 1645 ntBASIC17.76■□□□□ 0.43
KRT9P35527 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 IL9RP2-201ENST00000423948 1312 ntBASIC17.76■□□□□ 0.43
KRT9P35527 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 IGLL3P-201ENST00000412472 434 ntBASIC17.76■□□□□ 0.43
KRT9P35527 AL590627.1-203ENST00000421194 1026 ntBASIC17.76■□□□□ 0.43
KRT9P35527 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.76■□□□□ 0.43
KRT9P35527 AC145285.3-201ENST00000564603 959 ntBASIC17.76■□□□□ 0.43
KRT9P35527 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 AL645728.2-201ENST00000641974 660 ntBASIC17.76■□□□□ 0.43
KRT9P35527 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT9P35527 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT9P35527 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT9P35527 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT9P35527 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT9P35527 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT9P35527 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT9P35527 AC008677.1-201ENST00000519230 1561 ntBASIC17.75■□□□□ 0.43
KRT9P35527 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KRT9P35527 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms