Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.31■□□□□ 0.2
LSP1P33241 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LSP1P33241 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.31■□□□□ 0.2
LSP1P33241 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.31■□□□□ 0.2
LSP1P33241 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 RN7SL606P-201ENST00000472779 293 ntBASIC16.31■□□□□ 0.2
LSP1P33241 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 GUSBP12-201ENST00000513727 720 ntBASIC16.31■□□□□ 0.2
LSP1P33241 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.31■□□□□ 0.2
LSP1P33241 AC140113.3-201ENST00000605663 199 ntBASIC16.31■□□□□ 0.2
LSP1P33241 AC020765.3-201ENST00000613051 740 ntBASIC16.31■□□□□ 0.2
LSP1P33241 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 AC006504.5-208ENST00000588784 2401 ntBASIC16.31■□□□□ 0.2
LSP1P33241 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.31■□□□□ 0.2
LSP1P33241 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
LSP1P33241 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LSP1P33241 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.31■□□□□ 0.2
LSP1P33241 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
LSP1P33241 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.3■□□□□ 0.2
LSP1P33241 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
LSP1P33241 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 AL020989.1-201ENST00000422979 469 ntBASIC16.3■□□□□ 0.2
LSP1P33241 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.3■□□□□ 0.2
LSP1P33241 SLC25A3P1-201ENST00000443844 931 ntBASIC16.3■□□□□ 0.2
LSP1P33241 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.3■□□□□ 0.2
LSP1P33241 AL441883.1-201ENST00000566170 1045 ntBASIC16.3■□□□□ 0.2
LSP1P33241 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.3■□□□□ 0.2
LSP1P33241 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LSP1P33241 PMPCAP1-201ENST00000508114 1576 ntBASIC16.3■□□□□ 0.2
LSP1P33241 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
LSP1P33241 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LSP1P33241 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 C8orf49-201ENST00000525043 1968 ntBASIC16.29■□□□□ 0.2
LSP1P33241 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.29■□□□□ 0.2
LSP1P33241 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LSP1P33241 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.29■□□□□ 0.2
LSP1P33241 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.29■□□□□ 0.2
LSP1P33241 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.29■□□□□ 0.2
LSP1P33241 AL590787.1-201ENST00000568856 1315 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms