Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.08■□□□□ 0.49
COL11A1P12107 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL11A1P12107 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.08■□□□□ 0.49
COL11A1P12107 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL11A1P12107 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL11A1P12107 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL11A1P12107 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL11A1P12107 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.08■□□□□ 0.48
COL11A1P12107 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
COL11A1P12107 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.08■□□□□ 0.48
COL11A1P12107 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL11A1P12107 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL11A1P12107 DRD5P1-201ENST00000456605 1438 ntBASIC18.08■□□□□ 0.48
COL11A1P12107 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.08■□□□□ 0.48
COL11A1P12107 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.08■□□□□ 0.48
COL11A1P12107 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL11A1P12107 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.07■□□□□ 0.48
COL11A1P12107 AC022137.2-201ENST00000503482 481 ntBASIC18.07■□□□□ 0.48
COL11A1P12107 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 SLC25A47P1-201ENST00000531577 414 ntBASIC18.07■□□□□ 0.48
COL11A1P12107 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.07■□□□□ 0.48
COL11A1P12107 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.07■□□□□ 0.48
COL11A1P12107 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL11A1P12107 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.07■□□□□ 0.48
COL11A1P12107 KRT90P-201ENST00000549264 1064 ntBASIC18.07■□□□□ 0.48
COL11A1P12107 AC009542.2-202ENST00000619004 1067 ntBASIC18.07■□□□□ 0.48
COL11A1P12107 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COL11A1P12107 AC092364.2-201ENST00000596710 2692 ntBASIC18.06■□□□□ 0.48
COL11A1P12107 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COL11A1P12107 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.06■□□□□ 0.48
COL11A1P12107 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.06■□□□□ 0.48
COL11A1P12107 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
COL11A1P12107 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 BOLA2P3-201ENST00000404566 256 ntBASIC18.06■□□□□ 0.48
COL11A1P12107 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.06■□□□□ 0.48
COL11A1P12107 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.06■□□□□ 0.48
COL11A1P12107 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.06■□□□□ 0.48
COL11A1P12107 MIR4538-201ENST00000581377 78 ntBASIC18.06■□□□□ 0.48
COL11A1P12107 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.06■□□□□ 0.48
COL11A1P12107 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL11A1P12107 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL11A1P12107 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 C1QBPP1-201ENST00000400117 770 ntBASIC18.05■□□□□ 0.48
COL11A1P12107 BAATP1-201ENST00000412284 1225 ntBASIC18.05■□□□□ 0.48
COL11A1P12107 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.05■□□□□ 0.48
COL11A1P12107 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.05■□□□□ 0.48
COL11A1P12107 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms