Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 AZGP1P1-201ENST00000411909 902 ntBASIC17.67■□□□□ 0.42
VTNP04004 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.67■□□□□ 0.42
VTNP04004 AC245100.5-201ENST00000452108 331 ntBASIC17.67■□□□□ 0.42
VTNP04004 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.67■□□□□ 0.42
VTNP04004 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 AC243562.2-201ENST00000561247 970 ntBASIC17.67■□□□□ 0.42
VTNP04004 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.67■□□□□ 0.42
VTNP04004 AC074044.1-201ENST00000609673 707 ntBASIC17.67■□□□□ 0.42
VTNP04004 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.67■□□□□ 0.42
VTNP04004 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VTNP04004 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VTNP04004 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 SLC7A15P-201ENST00000424028 1363 ntBASIC17.66■□□□□ 0.42
VTNP04004 AL391825.1-201ENST00000457671 1364 ntBASIC17.66■□□□□ 0.42
VTNP04004 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VTNP04004 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.66■□□□□ 0.42
VTNP04004 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VTNP04004 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.66■□□□□ 0.42
VTNP04004 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 AC087499.6-201ENST00000411576 835 ntBASIC17.66■□□□□ 0.42
VTNP04004 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 CR383656.12-201ENST00000549567 513 ntBASIC17.66■□□□□ 0.42
VTNP04004 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
VTNP04004 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 AC007431.3-201ENST00000623221 587 ntBASIC17.66■□□□□ 0.42
VTNP04004 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.66■□□□□ 0.42
VTNP04004 AC138969.3-201ENST00000546612 1459 ntBASIC17.66■□□□□ 0.42
VTNP04004 AC138932.2-201ENST00000548268 1459 ntBASIC17.66■□□□□ 0.42
VTNP04004 AC126755.4-201ENST00000549796 1459 ntBASIC17.66■□□□□ 0.42
VTNP04004 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.66■□□□□ 0.42
VTNP04004 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.66■□□□□ 0.42
VTNP04004 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.66■□□□□ 0.42
VTNP04004 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTNP04004 BNIP3P1-202ENST00000550043 1585 ntBASIC17.66■□□□□ 0.42
VTNP04004 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.65■□□□□ 0.42
VTNP04004 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 KRT8P37-201ENST00000451609 1420 ntBASIC17.65■□□□□ 0.42
VTNP04004 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
VTNP04004 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.65■□□□□ 0.42
VTNP04004 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.65■□□□□ 0.42
VTNP04004 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms