Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.02■□□□□ 0.31
APOEP02649 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.02■□□□□ 0.31
APOEP02649 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOEP02649 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOEP02649 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.02■□□□□ 0.31
APOEP02649 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOEP02649 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
APOEP02649 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APOEP02649 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APOEP02649 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 AC005052.1-201ENST00000625181 2492 ntBASIC17.01■□□□□ 0.31
APOEP02649 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.01■□□□□ 0.31
APOEP02649 HLA-J-203ENST00000494367 1087 ntBASIC17.01■□□□□ 0.31
APOEP02649 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.01■□□□□ 0.31
APOEP02649 AC025678.2-201ENST00000562061 970 ntBASIC17.01■□□□□ 0.31
APOEP02649 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.01■□□□□ 0.31
APOEP02649 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.01■□□□□ 0.31
APOEP02649 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 AL162727.3-201ENST00000635661 2787 ntBASIC17.01■□□□□ 0.31
APOEP02649 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APOEP02649 AC005622.1-201ENST00000636801 1703 ntBASIC17.01■□□□□ 0.31
APOEP02649 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 U82695.1-201ENST00000635752 1889 ntBASIC17.01■□□□□ 0.31
APOEP02649 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOEP02649 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17■□□□□ 0.31
APOEP02649 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APOEP02649 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APOEP02649 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APOEP02649 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 HLA-H-201ENST00000383620 1096 ntBASIC17■□□□□ 0.31
APOEP02649 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 PON3-203ENST00000427422 894 ntTSL 3 BASIC17■□□□□ 0.31
APOEP02649 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 ALG1L8P-201ENST00000533887 760 ntBASIC17■□□□□ 0.31
APOEP02649 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17■□□□□ 0.31
APOEP02649 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17■□□□□ 0.31
APOEP02649 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APOEP02649 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17■□□□□ 0.31
APOEP02649 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APOEP02649 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APOEP02649 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
APOEP02649 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17■□□□□ 0.31
APOEP02649 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOEP02649 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.99■□□□□ 0.31
APOEP02649 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
APOEP02649 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
APOEP02649 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
APOEP02649 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
APOEP02649 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOEP02649 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms