Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
NKX2-2O95096 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 AC008741.2-201ENST00000612792 3115 ntBASIC14.93□□□□□ -0.02
NKX2-2O95096 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-2O95096 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-2O95096 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-2O95096 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-2O95096 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 AC004987.2-201ENST00000395959 1148 ntBASIC14.92□□□□□ -0.02
NKX2-2O95096 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 AC004967.1-201ENST00000453589 447 ntBASIC14.92□□□□□ -0.02
NKX2-2O95096 AC023141.5-201ENST00000458585 616 ntBASIC14.92□□□□□ -0.02
NKX2-2O95096 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-2O95096 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-2O95096 AC026979.3-201ENST00000607315 403 ntBASIC14.92□□□□□ -0.02
NKX2-2O95096 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-2O95096 AC134684.3-201ENST00000641758 218 ntBASIC14.92□□□□□ -0.02
NKX2-2O95096 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-2O95096 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-2O95096 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-2O95096 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-2O95096 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-2O95096 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-2O95096 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-2O95096 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-2O95096 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-2O95096 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 BNIP3P1-202ENST00000550043 1585 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NKX2-2O95096 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 CNN2P11-201ENST00000429351 262 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 RBPMS2P1-201ENST00000437762 623 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.91□□□□□ -0.02
NKX2-2O95096 SPDYE14P-201ENST00000442619 822 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-2O95096 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NKX2-2O95096 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-2O95096 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-2O95096 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-2O95096 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
NKX2-2O95096 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-2O95096 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 AL136982.4-201ENST00000437689 1740 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.91□□□□□ -0.02
NKX2-2O95096 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-2O95096 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-2O95096 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-2O95096 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-2O95096 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-2O95096 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-2O95096 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms