Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ3O43525 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
KCNQ3O43525 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNQ3O43525 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNQ3O43525 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 ACA64.2-201ENST00000459014 129 ntBASIC20.58■□□□□ 0.89
KCNQ3O43525 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNQ3O43525 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNQ3O43525 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.58■□□□□ 0.89
KCNQ3O43525 AL359881.2-201ENST00000602973 570 ntBASIC20.58■□□□□ 0.89
KCNQ3O43525 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ3O43525 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ3O43525 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KCNQ3O43525 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KCNQ3O43525 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 BCL2-203ENST00000589955 5011 ntBASIC20.58■□□□□ 0.88
KCNQ3O43525 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
KCNQ3O43525 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
KCNQ3O43525 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ3O43525 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.58■□□□□ 0.88
KCNQ3O43525 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.57■□□□□ 0.88
KCNQ3O43525 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNQ3O43525 AC011495.1-201ENST00000498085 584 ntBASIC20.57■□□□□ 0.88
KCNQ3O43525 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.57■□□□□ 0.88
KCNQ3O43525 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.57■□□□□ 0.88
KCNQ3O43525 HNRNPUP1-201ENST00000554987 333 ntBASIC20.57■□□□□ 0.88
KCNQ3O43525 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.57■□□□□ 0.88
KCNQ3O43525 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.57■□□□□ 0.88
KCNQ3O43525 AL162274.1-201ENST00000617191 1098 ntBASIC20.57■□□□□ 0.88
KCNQ3O43525 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNQ3O43525 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 AC006449.6-201ENST00000612330 2296 ntBASIC20.57■□□□□ 0.88
KCNQ3O43525 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 REXO1L1P-202ENST00000608646 1974 ntBASIC20.57■□□□□ 0.88
KCNQ3O43525 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNQ3O43525 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNQ3O43525 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ3O43525 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ3O43525 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KCNQ3O43525 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNQ3O43525 HAUS4P1-201ENST00000406739 1145 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.56■□□□□ 0.88
KCNQ3O43525 TTTY23B-201ENST00000442790 549 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 PHKG1P2-201ENST00000457537 863 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ3O43525 KRT17P8-201ENST00000540749 863 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 RRP7BP-205ENST00000566851 833 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ3O43525 MIR4259-201ENST00000584466 101 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 AC097359.3-201ENST00000603982 1210 ntBASIC20.56■□□□□ 0.88
KCNQ3O43525 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ3O43525 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ3O43525 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ3O43525 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ3O43525 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KCNQ3O43525 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNQ3O43525 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
KCNQ3O43525 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ3O43525 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
KCNQ3O43525 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNQ3O43525 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNQ3O43525 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNQ3O43525 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.55■□□□□ 0.88
KCNQ3O43525 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNQ3O43525 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms