Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.09□□□□□ -0.15
PHF1O43189 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.09□□□□□ -0.15
PHF1O43189 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 AL008721.1-201ENST00000609964 604 ntBASIC14.09□□□□□ -0.15
PHF1O43189 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.09□□□□□ -0.15
PHF1O43189 AC105339.1-204ENST00000636249 355 ntBASIC14.09□□□□□ -0.15
PHF1O43189 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PHF1O43189 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.09□□□□□ -0.15
PHF1O43189 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 TUBB8P12-201ENST00000308911 1335 ntBASIC14.09□□□□□ -0.15
PHF1O43189 TUBB7P-202ENST00000428444 1305 ntBASIC14.09□□□□□ -0.15
PHF1O43189 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 TUBB8P7-204ENST00000567960 1332 ntBASIC14.09□□□□□ -0.15
PHF1O43189 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.09□□□□□ -0.15
PHF1O43189 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PHF1O43189 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PHF1O43189 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.08□□□□□ -0.15
PHF1O43189 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PHF1O43189 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PHF1O43189 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.08□□□□□ -0.16
PHF1O43189 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.08□□□□□ -0.16
PHF1O43189 AC236430.1-201ENST00000402231 743 ntBASIC14.08□□□□□ -0.16
PHF1O43189 GAPDHP21-201ENST00000450301 1010 ntBASIC14.08□□□□□ -0.16
PHF1O43189 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 AC067863.1-201ENST00000494933 530 ntBASIC14.08□□□□□ -0.16
PHF1O43189 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.08□□□□□ -0.16
PHF1O43189 AC107918.2-201ENST00000530817 355 ntBASIC14.08□□□□□ -0.16
PHF1O43189 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
PHF1O43189 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.08□□□□□ -0.16
PHF1O43189 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.08□□□□□ -0.16
PHF1O43189 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.08□□□□□ -0.16
PHF1O43189 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PHF1O43189 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PHF1O43189 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 AC007326.2-201ENST00000624224 7579 ntBASIC14.07□□□□□ -0.16
PHF1O43189 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.07□□□□□ -0.16
PHF1O43189 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.07□□□□□ -0.16
PHF1O43189 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.07□□□□□ -0.16
PHF1O43189 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.07□□□□□ -0.16
PHF1O43189 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.07□□□□□ -0.16
PHF1O43189 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PHF1O43189 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PHF1O43189 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms