Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 VTC2YFL004W 2487 nt5.79□□□□□ -1.48
YNL040WP53960 CIT3YPR001W 1461 nt5.78□□□□□ -1.48
YNL040WP53960 YDL119CYDL119C 924 nt5.78□□□□□ -1.48
YNL040WP53960 CBP4YGR174C 513 nt5.78□□□□□ -1.48
YNL040WP53960 SPG4YMR107W 348 nt5.78□□□□□ -1.48
YNL040WP53960 ARR3YPR201W 1215 nt5.78□□□□□ -1.48
YNL040WP53960 PDC1YLR044C 1692 nt5.78□□□□□ -1.48
YNL040WP53960 SHO1YER118C 1104 nt5.77□□□□□ -1.49
YNL040WP53960 YNR075C-AYNR075C-A 93 nt5.77□□□□□ -1.49
YNL040WP53960 RPS15YOL040C 429 nt5.77□□□□□ -1.49
YNL040WP53960 HPF1YOL155C 2904 nt5.77□□□□□ -1.49
YNL040WP53960 YAP1801YHR161C 1914 nt5.76□□□□□ -1.49
YNL040WP53960 YGR022CYGR022C 330 nt5.76□□□□□ -1.49
YNL040WP53960 MRP17YKL003C 396 nt5.76□□□□□ -1.49
YNL040WP53960 YIR007WYIR007W 2295 nt5.76□□□□□ -1.49
YNL040WP53960 IDP3YNL009W 1263 nt5.75□□□□□ -1.49
YNL040WP53960 ERI1YPL096C-A 207 nt5.75□□□□□ -1.49
YNL040WP53960 TRK2YKR050W 2670 nt5.75□□□□□ -1.49
YNL040WP53960 GDA1YEL042W 1557 nt5.75□□□□□ -1.49
YNL040WP53960 SEC12YNR026C 1416 nt5.74□□□□□ -1.49
YNL040WP53960 CDC16YKL022C 2523 nt5.74□□□□□ -1.49
YNL040WP53960 HEM3YDL205C 984 nt5.74□□□□□ -1.49
YNL040WP53960 PGA3YML125C 939 nt5.74□□□□□ -1.49
YNL040WP53960 YBR226CYBR226C 411 nt5.74□□□□□ -1.49
YNL040WP53960 IME2YJL106W 1938 nt5.74□□□□□ -1.49
YNL040WP53960 UGO1YDR470C 1509 nt5.73□□□□□ -1.49
YNL040WP53960 CDC19YAL038W 1503 nt5.73□□□□□ -1.49
YNL040WP53960 SHE10YGL228W 1734 nt5.72□□□□□ -1.49
YNL040WP53960 RPR2YIR015W 435 nt5.72□□□□□ -1.49
YNL040WP53960 DCN1YLR128W 810 nt5.72□□□□□ -1.49
YNL040WP53960 MRPL36YBR122C 534 nt5.72□□□□□ -1.49
YNL040WP53960 HXT3YDR345C 1704 nt5.71□□□□□ -1.49
YNL040WP53960 MNN2YBR015C 1794 nt5.71□□□□□ -1.5
YNL040WP53960 COX26YDR119W-A 201 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)CtN(GUU)C 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)FtN(GUU)F 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)GtN(GUU)G 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)KtN(GUU)K 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)LtN(GUU)L 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)N1tN(GUU)N1 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)N2tN(GUU)N2 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)O1tN(GUU)O1 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)O2tN(GUU)O2 74 nt5.71□□□□□ -1.5
YNL040WP53960 tN(GUU)PtN(GUU)P 74 nt5.71□□□□□ -1.5
YNL040WP53960 RHO4YKR055W 876 nt5.71□□□□□ -1.5
YNL040WP53960 YLR296WYLR296W 327 nt5.71□□□□□ -1.5
YNL040WP53960 HOR7YMR251W-A 180 nt5.71□□□□□ -1.5
YNL040WP53960 PIN2YOR104W 849 nt5.71□□□□□ -1.5
YNL040WP53960 HXT15YDL245C 1704 nt5.71□□□□□ -1.5
YNL040WP53960 HXT16YJR158W 1704 nt5.71□□□□□ -1.5
YNL040WP53960 LDB19YOR322C 2457 nt5.7□□□□□ -1.5
YNL040WP53960 UTP7YER082C 1665 nt5.7□□□□□ -1.5
YNL040WP53960 BAP2YBR068C 1830 nt5.7□□□□□ -1.5
YNL040WP53960 HSX1tR(CCU)J 72 nt5.7□□□□□ -1.5
YNL040WP53960 YIL060WYIL060W 435 nt5.7□□□□□ -1.5
YNL040WP53960 MTC2YKL098W 1074 nt5.7□□□□□ -1.5
YNL040WP53960 PGA2YNL149C 390 nt5.7□□□□□ -1.5
YNL040WP53960 CPA1YOR303W 1236 nt5.7□□□□□ -1.5
YNL040WP53960 PIF1YML061C 2580 nt5.7□□□□□ -1.5
YNL040WP53960 SCT1YBL011W 2280 nt5.69□□□□□ -1.5
YNL040WP53960 YBL044WYBL044W 369 nt5.69□□□□□ -1.5
YNL040WP53960 YBR230W-AYBR230W-A 201 nt5.69□□□□□ -1.5
YNL040WP53960 HFI1YPL254W 1467 nt5.69□□□□□ -1.5
YNL040WP53960 ABZ1YNR033W 2364 nt5.69□□□□□ -1.5
YNL040WP53960 SNU71YGR013W 1863 nt5.68□□□□□ -1.5
YNL040WP53960 GPT2YKR067W 2232 nt5.68□□□□□ -1.5
YNL040WP53960 TEF1YPR080W 1377 nt5.68□□□□□ -1.5
YNL040WP53960 TEF2YBR118W 1377 nt5.68□□□□□ -1.5
YNL040WP53960 ACF2YLR144C 2340 nt5.68□□□□□ -1.5
YNL040WP53960 YDL034WYDL034W 345 nt5.68□□□□□ -1.5
YNL040WP53960 MTQ1YNL063W 945 nt5.68□□□□□ -1.5
YNL040WP53960 YNR048WYNR048W 1182 nt5.68□□□□□ -1.5
YNL040WP53960 JIP4YDR475C 2631 nt5.68□□□□□ -1.5
YNL040WP53960 RPT2YDL007W 1314 nt5.68□□□□□ -1.5
YNL040WP53960 RAT1YOR048C 3021 nt5.67□□□□□ -1.5
YNL040WP53960 SIA1YOR137C 1869 nt5.67□□□□□ -1.5
YNL040WP53960 YCR097W-AYCR097W-A 267 nt5.67□□□□□ -1.5
YNL040WP53960 ASF2YDL197C 1578 nt5.67□□□□□ -1.5
YNL040WP53960 MAK32YCR019W 1092 nt5.66□□□□□ -1.5
YNL040WP53960 COS9YKL219W 1224 nt5.66□□□□□ -1.5
YNL040WP53960 GEP5YLR091W 882 nt5.66□□□□□ -1.5
YNL040WP53960 MRP51YPL118W 1035 nt5.66□□□□□ -1.5
YNL040WP53960 RPT1YKL145W 1404 nt5.65□□□□□ -1.5
YNL040WP53960 YEL077CYEL077C 3834 nt5.65□□□□□ -1.5
YNL040WP53960 GIR2YDR152W 798 nt5.65□□□□□ -1.5
YNL040WP53960 CAD1YDR423C 1230 nt5.65□□□□□ -1.5
YNL040WP53960 YGR176WYGR176W 348 nt5.65□□□□□ -1.5
YNL040WP53960 EFM4YIL064W 774 nt5.65□□□□□ -1.5
YNL040WP53960 TFS1YLR178C 660 nt5.65□□□□□ -1.5
YNL040WP53960 YBL070CYBL070C 321 nt5.65□□□□□ -1.5
YNL040WP53960 BUD9YGR041W 1644 nt5.65□□□□□ -1.51
YNL040WP53960 RPT4YOR259C 1314 nt5.65□□□□□ -1.51
YNL040WP53960 STE13YOR219C 2796 nt5.65□□□□□ -1.51
YNL040WP53960 UTP18YJL069C 1785 nt5.65□□□□□ -1.51
YNL040WP53960 NQM1YGR043C 1002 nt5.64□□□□□ -1.51
YNL040WP53960 FAF1YIL019W 1041 nt5.64□□□□□ -1.51
YNL040WP53960 YJL193WYJL193W 1209 nt5.64□□□□□ -1.51
YNL040WP53960 YLL059CYLL059C 507 nt5.64□□□□□ -1.51
YNL040WP53960 DAL82YNL314W 768 nt5.64□□□□□ -1.51
YNL040WP53960 ATP4YPL078C 735 nt5.64□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms