Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETP07949 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RETP07949 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETP07949 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETP07949 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
RETP07949 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETP07949 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETP07949 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.9■■□□□ 1.42
RETP07949 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.9■■□□□ 1.42
RETP07949 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RETP07949 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.9■■□□□ 1.42
RETP07949 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.89■■□□□ 1.41
RETP07949 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RETP07949 MIR4466-201ENST00000606121 54 ntBASIC23.89■■□□□ 1.41
RETP07949 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RETP07949 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETP07949 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RETP07949 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETP07949 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.88■■□□□ 1.41
RETP07949 MTDHP2-201ENST00000601468 714 ntBASIC23.88■■□□□ 1.41
RETP07949 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RETP07949 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RETP07949 ZNRF2P3-201ENST00000424200 374 ntBASIC23.87■■□□□ 1.41
RETP07949 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RETP07949 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.87■■□□□ 1.41
RETP07949 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RETP07949 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.86■■□□□ 1.41
RETP07949 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.86■■□□□ 1.41
RETP07949 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETP07949 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETP07949 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETP07949 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETP07949 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETP07949 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.85■■□□□ 1.41
RETP07949 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.85■■□□□ 1.41
RETP07949 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETP07949 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETP07949 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.84■■□□□ 1.41
RETP07949 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETP07949 MIR4281-201ENST00000580852 62 ntBASIC23.84■■□□□ 1.41
RETP07949 AC104564.3-201ENST00000582367 638 ntBASIC23.84■■□□□ 1.41
RETP07949 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
RETP07949 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETP07949 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.83■■□□□ 1.41
RETP07949 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETP07949 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RETP07949 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.83■■□□□ 1.41
RETP07949 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RETP07949 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.83■■□□□ 1.41
RETP07949 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RETP07949 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.83■■□□□ 1.4
RETP07949 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.82■■□□□ 1.4
RETP07949 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETP07949 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.82■■□□□ 1.4
RETP07949 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RETP07949 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETP07949 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RETP07949 AC026271.2-201ENST00000428091 497 ntBASIC23.82■■□□□ 1.4
RETP07949 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETP07949 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RETP07949 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.81■■□□□ 1.4
RETP07949 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.81■■□□□ 1.4
RETP07949 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RETP07949 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.81■■□□□ 1.4
RETP07949 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RETP07949 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.8■■□□□ 1.4
RETP07949 AC142381.2-201ENST00000566120 298 ntBASIC23.8■■□□□ 1.4
RETP07949 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.8■■□□□ 1.4
RETP07949 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETP07949 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.79■■□□□ 1.4
RETP07949 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.79■■□□□ 1.4
RETP07949 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETP07949 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETP07949 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETP07949 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RETP07949 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.79■■□□□ 1.4
RETP07949 MIR5787-201ENST00000611784 55 ntBASIC23.79■■□□□ 1.4
RETP07949 AC106739.1-201ENST00000617035 715 ntBASIC23.79■■□□□ 1.4
RETP07949 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RETP07949 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RETP07949 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RETP07949 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.78■■□□□ 1.4
RETP07949 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.78■■□□□ 1.4
RETP07949 AL512631.2-201ENST00000604634 923 ntBASIC23.78■■□□□ 1.4
RETP07949 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RETP07949 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.78■■□□□ 1.4
RETP07949 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RETP07949 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.78■■□□□ 1.4
RETP07949 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.78■■□□□ 1.4
RETP07949 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.78■■□□□ 1.4
RETP07949 PBX2P1-201ENST00000493219 1291 ntBASIC23.77■■□□□ 1.4
RETP07949 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETP07949 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.76■■□□□ 1.39
RETP07949 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RETP07949 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms