Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDC42BPBQ9Y5S2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 AC006001.1-201ENST00000325130 474 ntBASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 C2orf27AP3-201ENST00000434123 579 ntBASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 AL354718.3-201ENST00000616414 581 ntBASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 CR382287.1-201ENST00000623954 586 ntBASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDC42BPBQ9Y5S2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 MIR1202-201ENST00000408529 83 ntBASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 FAM197Y7-201ENST00000432892 766 ntBASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDC42BPBQ9Y5S2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 AL591846.1-201ENST00000451736 433 ntBASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 HLA-DPB2-205ENST00000435074 1188 ntBASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
CDC42BPBQ9Y5S2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 Z93015.1-201ENST00000451718 390 ntBASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDC42BPBQ9Y5S2 AC105129.2-201ENST00000559536 390 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms