Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMG20BQ9P0W2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AL136982.4-201ENST00000437689 1740 ntBASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AL035633.1-201ENST00000406139 838 ntBASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 LINC02560-201ENST00000596379 459 ntBASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 AC026979.3-201ENST00000607315 403 ntBASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMG20BQ9P0W2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AC079328.2-201ENST00000561241 3354 ntBASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AL139010.1-201ENST00000454878 894 ntBASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AL512361.1-201ENST00000554200 418 ntBASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 AC008761.3-201ENST00000624803 892 ntBASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMG20BQ9P0W2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms